Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Sievers F, Söding J, Thompson JD, Higgins DG, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R et al. You can download the appropriate application installer from here: The Clustal Omega program can also be downloaded for stand alone use on personal computers running Mac, Windows or Linux operating systems from the following location:ĭownloading the JalView Sequence Alignment Results Viewer:Īlthough Clustal Omega provides a serviceable text-based display of alignment results, the JalView alignment results viewer provides a much nicer way to do it. The application can be used online via hosted web servers at the following locations:Ĭlustal Omega (Web Server at Pasteur Mobyle Portal)ĭownloading the Application to Your Personal Computer: Uploaded sequence files are limited to a maximum of 2 MB. The current version of the software accepts a maximum of 2000 sequences.
Clustal Omega is an improved version of that tool.Īccepted sequence formats are GCG, FASTA, EMBL, GenBank, PIR, NBRF, PHYLIP or UniProtKB/Swiss-Prot. For many years, the previous version of the tool, Clustal W, was widely used for this kind of multiple sequence alignment.
Clustal Omega is a multiple sequence alignment tool best used for aligning similar sequence regions between three or more RNA, DNA or protein sequences.
